ATLANTIS PROCESSING TOOLBOX

for source-based connectivity based on EEG/MEG

[sorry, the page under development]

Preprocessing pipeline for analyzing source based connectivity EEG/MEG data. Extensively uses Fieldtrip routines but also requires eeglab and binica tools. For individual head/source models FreeSurfer is also required. Currently supports bdf, eeglab (EEG) and ctf (MEG) formats.

Instalation:

Requires Matlab environment. Unpack and add the directories into Matlab path. The toolbox requires FieldTrip to installed as well. Includes FastICA, Multar and some EEGlab functions.

How to use:

Analysis is launched by EX_SETUP file, where all the analysis parameters are defined. The latter can be found in the templates directory.
Currently following formats are supported: bdf, eeglab, ctf

References:

S Spadone, M Wyczesany, S Della Penna, M Corbetta, P Capotosto; Directed flow of beta band communication during reorienting of attention within the dorsal attention network; Brain connectivity 11 (9), 717-724

MJ Kaminski, KJ Blinowska; A new method of the description of the information flow in the brain structures; Biological cybernetics 65 (3), 203-210

D Mantini, S Della Penna, L Marzetti, F De Pasquale, V Pizzella, M Corbetta, ...; A signal-processing pipeline for magnetoencephalography resting-state networks; Brain connectivity 1 (1), 49-59

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In memory of Adam Labaza, who greatly contributed to our works and passed away in 2021.